Essa é uma abordagem muito mais fácil para acessar seus dados delimitados por pipe. Você encontra seus dados semelhantes a tabelas em #temp2. A partir daqui deve ser fácil
UPDATE ,INSERT ou MERGE seus dados em seu destino. Atenção:eu poderia apenas adivinhar o significado de suas colunas, então os nomes das colunas podem ser lixo...
CREATE TABLE #temp1(WHOLEROW VARCHAR(8000));
INSERT INTO #temp1 VALUES
('F20160323-1000|FSI|BISCOCHO|DELIVERED|42317|||||GINA T|TENANT|42311')
,('F20160323-1001|FSI|MARTINNE|DELIVERED|42314|||||MERLIE STRADA|IN LAW|42311')
,('F20160323-1002|FSI|MANALO|DELIVERED|42313|||||GINA A|TENANT|42311')
,('F20160323-1004|FSI|HAMOY CAJAYON|DELIVERED|42311|||||MERLIE QTRADA|IN LAW|42311')
,('F20160323-1003|FSI|FRANCISCA|DELIVERED|42312|||||GINA B|TENANT|42311')
,('F20160323-1005|FSI|NINA|DELIVERED|42318|||||MERLIE STRADA|IN LAW|42311');
;WITH Splitted(AsXml) AS
(
SELECT CAST('<x>' + REPLACE(t1.WHOLEROW,'|','</x><x>') + '</x>' AS XML)
FROM #temp1 AS t1
)
SELECT AsXml.value('x[1]','varchar(max)') AS ID
,ID_Splitted.*
,AsXml.value('x[2]','varchar(max)') AS FSI_Field
,AsXml.value('x[3]','varchar(max)') AS CAPTION
,AsXml.value('x[4]','varchar(max)') AS STATUS
,AsXml.value('x[5]','varchar(max)') AS NUMBER
,AsXml.value('x[6]','varchar(max)') AS Fld1
,AsXml.value('x[7]','varchar(max)') AS Fld2
,AsXml.value('x[8]','varchar(max)') AS Fld3
,AsXml.value('x[9]','varchar(max)') AS Fld4
,AsXml.value('x[10]','varchar(max)') AS TARGET
,AsXml.value('x[11]','varchar(max)') AS TARGET_TYPE
,AsXml.value('x[12]','varchar(max)') AS TARGET_NUMBER
INTO #temp2
FROM Splitted
CROSS APPLY(SELECT LEFT( AsXml.value('x[1]','varchar(max)'),1) AS FirstLetter
,CAST(SUBSTRING(AsXml.value('x[1]','varchar(max)'),2,8) AS DATE) AS IncludedDate
,CAST(SUBSTRING( AsXml.value('x[1]','varchar(max)'),11,100) AS INT) AS IncludedNumber) AS ID_Splitted;
SELECT * FROM #temp2;
DROP TABLE #temp2;
DROP TABLE #temp1;
O resultado
ID FirstLetter IncludedDate InclNmbr FSI CAPTION STATUS NUMBER TARGET TYPE NUMBER
F20160323-1000 F 2016-03-23 1000 FSI BISCOCHO DELIVERED 42317 GINA T TENANT 42311
F20160323-1001 F 2016-03-23 1001 FSI MARTINNE DELIVERED 42314 MERLIE STRADA IN LAW 42311
F20160323-1002 F 2016-03-23 1002 FSI MANALO DELIVERED 42313 GINA A TENANT 42311
F20160323-1004 F 2016-03-23 1004 FSI HAMOY CAJAYONDELIVERED 42311 MERLIE QTRADA IN LAW 42311
F20160323-1003 F 2016-03-23 1003 FSI FRANCISCA DELIVERED 42312 GINA B TENANT 42311
F20160323-1005 F 2016-03-23 1005 FSI NINA DELIVERED 42318 MERLIE STRADA IN LAW 42311
